Mercurial > dive4elements > river

annotate backend/src/main/java/org/dive4elements/river/importer/parsers/SedimentLoadParser.java @ 9650:a2a42a6bac6b

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Importer (s/u-info) extensions: outer try/catch for parse and log of line no, catching parsing exception if not enough value fields, parsing error and warning log messages with line number, detecting and rejecting duplicate data series, better differentiation between error and warning log messages
author mschaefer
date Mon, 23 Mar 2020 14:57:03 +0100
parents 8fbc0649da13
children 0a5239a1e46e
rev   line source
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1 /* Copyright (C) 2011, 2012, 2013 by Bundesanstalt für Gewässerkunde
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2 * Software engineering by Intevation GmbH
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3 *
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4 * This file is Free Software under the GNU AGPL (>=v3)
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5 * and comes with ABSOLUTELY NO WARRANTY! Check out the
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6 * documentation coming with Dive4Elements River for details.
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7 */
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8
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9 package org.dive4elements.river.importer.parsers;
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10
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11 import java.text.ParseException;
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12
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13 import java.util.ArrayList;
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14 import java.util.List;
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15
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16 import org.apache.log4j.Logger;
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17
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18 import org.dive4elements.river.importer.ImporterSession;
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19 import org.dive4elements.river.importer.ImportSedimentLoad;
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20 import org.dive4elements.river.importer.ImportSedimentLoadValue;
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21
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22 import org.dive4elements.river.model.River;
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23 import org.dive4elements.river.model.MeasurementStation;
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24
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25 /** Parses sediment load longitudinal section files. */
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26 public class SedimentLoadParser extends AbstractSedimentLoadParser {
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27 private static final Logger log =
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28 Logger.getLogger(SedimentLoadParser.class);
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29
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30
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31 public static final String GRAINFRACTION_NAME_SUSP = "suspended_sediment";
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32
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33 public static final String GRAINFRACTION_NAME_TOTAL = "total";
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34
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35 protected List<ImportSedimentLoad> sedimentLoads;
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36
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37 protected ImportSedimentLoad[] current;
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38
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39 protected River river;
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40
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41 public SedimentLoadParser() {
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42 sedimentLoads = new ArrayList<ImportSedimentLoad>();
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43 }
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44
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45 public SedimentLoadParser(River river) {
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46 sedimentLoads = new ArrayList<ImportSedimentLoad>();
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47 this.river = river;
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48 }
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49
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50
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51
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52 @Override
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53 protected void reset() {
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54 current = null;
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55 grainFraction = null;
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56 }
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57
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58
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59 @Override
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60 protected void finish() {
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61 if (current != null) {
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62 for (ImportSedimentLoad isy: current) {
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63 sedimentLoads.add(isy);
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64 }
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65 }
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66
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67 description = null;
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68 }
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69
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70
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71 @Override
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72 protected void handleMetaLine(String line) throws LineParserException {
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73 if (handleMetaFraction(line)) {
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74 return;
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75 }
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76 if (handleMetaFractionName(line)) {
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77 return;
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78 }
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79 if (handleMetaSQTimeInterval(line)) {
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80 return;
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81 }
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82 if (handleColumnNames(line)) {
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83 return;
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84 }
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85 log.warn("ASLP: Unknown meta line: '" + line + "'");
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86 }
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87
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88
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89 private void initializeSedimentLoadValues(String[] vals,
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90 MeasurementStation m) throws ParseException {
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91 for (int i = 1, n = columnNames.length-1; i < n; i++) {
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92 String curVal = vals[i];
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93
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94 if (curVal != null && curVal.length() > 0) {
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95 current[i-1].addValue(new ImportSedimentLoadValue(
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96 m, nf.parse(curVal).doubleValue()
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97 ));
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98 }
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99 }
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100 }
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101
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102 @Override
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103 protected void handleDataLine(String line) {
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104 String[] vals = line.split(SEPERATOR_CHAR);
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105
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106 if (vals == null || vals.length < columnNames.length-1) {
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107 log.warn("SLP: skip invalid data line: '" + line + "'");
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108 return;
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109 }
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110
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111 try {
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112 Double km = nf.parse(vals[0]).doubleValue();
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113
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114 List<MeasurementStation> ms =
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115 ImporterSession.getInstance().getMeasurementStations(
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116 river, km);
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117
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118 String gfn = grainFraction.getPeer().getName();
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119
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120 if (ms != null && !ms.isEmpty()) {
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121
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122 // Check for measurement station at km fitting grain fraction
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123 for (MeasurementStation m : ms) {
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124 if (gfn.equals(GRAINFRACTION_NAME_TOTAL)) {
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125 // total load can be at any station type
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126 initializeSedimentLoadValues(vals, m);
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127 return;
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128 }
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129 if (gfn.equals(GRAINFRACTION_NAME_SUSP) &&
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130 m.getMeasurementType().equals(
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131 MeasurementStation.MEASUREMENT_TYPE_SUSP)) {
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132 // susp. sediment can only be at respective stations
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133 initializeSedimentLoadValues(vals, m);
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134 return;
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135 }
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136 if (!gfn.equals(GRAINFRACTION_NAME_SUSP) &&
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137 m.getMeasurementType().equals(
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138 MeasurementStation.MEASUREMENT_TYPE_BEDLOAD)) {
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139 /** anything but total load and susp. sediment
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140 can only be at bed load measurement stations */
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141 initializeSedimentLoadValues(vals, m);
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142 return;
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143 }
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144 }
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145 log.error("SLP: No measurement station at km " + km +
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146 " fitting grain fraction " + gfn +
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147 " on river " + river.getName());
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148 return;
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149 }
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150 else {
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151 log.error("SLP: No measurement station at km " + km +
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152 " on river " + river.getName());
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153 return;
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154 }
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155 }
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156 catch (ParseException pe) {
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157 log.warn("SLP: unparseable number in data row '" + line + "':", pe);
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158 }
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159 }
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160
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161
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162 @Override
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163 protected void initializeSedimentLoads() {
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164 // skip first column (Fluss-km) and last column (Hinweise)
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165 current = new ImportSedimentLoad[columnNames.length-2];
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166
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167 Integer kind;
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168
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169 if (inputFile.getAbsolutePath().contains("amtliche Epochen")) {
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170 kind = new Integer(1);
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171 }
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172 else {
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173 kind = new Integer(0);
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174 }
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175
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176 for (int i = 0, n = columnNames.length; i < n-2; i++) {
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177 current[i] = new ImportSedimentLoad(
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178 grainFraction,
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179 getTimeInterval(columnNames[i+1]),
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180 sqTimeInterval,
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181 description,
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182 kind);
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183 }
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184 }
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185
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186
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187 public List<ImportSedimentLoad> getSedimentLoads() {
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188 return sedimentLoads;
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189 }
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190 }
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191 // vim:set ts=4 sw=4 si et sta sts=4 fenc=utf8 :
http://dive4elements.wald.intevation.org