Mercurial > dive4elements > river
annotate flys-artifacts/src/main/java/de/intevation/flys/artifacts/math/GrubbsOutlier.java @ 5622:b28a6d05e969
Add a new mechanism in mapfish print call to add arbitary data maps
Data properties are identified by starting with mapfish-data
and they are then split in info value pairs where info
can be the description of the information and value the value
of the information to be transported in the data map.
author | Andre Heinecke <aheinecke@intevation.de> |
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date | Tue, 09 Apr 2013 19:04:32 +0200 |
parents | a7d080347ac3 |
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rev | line source |
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1 package de.intevation.flys.artifacts.math; |
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2 |
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3 import java.util.List; |
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4 |
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5 import org.apache.commons.math.MathException; |
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6 |
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7 import org.apache.commons.math.distribution.TDistributionImpl; |
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8 |
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9 import org.apache.commons.math.stat.descriptive.moment.Mean; |
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10 import org.apache.commons.math.stat.descriptive.moment.StandardDeviation; |
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11 |
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12 import org.apache.log4j.Logger; |
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13 |
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14 public class GrubbsOutlier |
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15 { |
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16 public static final double EPSILON = 1e-5; |
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17 |
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18 public static final double DEFAULT_ALPHA = 0.05; |
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19 |
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20 private static Logger log = Logger.getLogger(GrubbsOutlier.class); |
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21 |
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22 protected GrubbsOutlier() { |
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23 } |
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24 |
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25 public static Integer findOutlier(List<Double> values) { |
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26 return findOutlier(values, DEFAULT_ALPHA, null); |
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27 } |
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28 |
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29 public static Integer findOutlier( |
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30 List<Double> values, |
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31 double alpha, |
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32 double[] stdDevResult |
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33 ) { |
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34 boolean debug = log.isDebugEnabled(); |
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35 |
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36 if (debug) { |
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37 log.debug("outliers significance: " + alpha); |
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38 } |
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39 |
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40 alpha = 1d - alpha; |
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41 |
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42 int N = values.size(); |
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43 |
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44 if (debug) { |
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45 log.debug("Values to check: " + N); |
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46 } |
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47 |
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48 if (N < 3) { |
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49 return null; |
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50 } |
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51 |
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52 Mean mean = new Mean(); |
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53 StandardDeviation std = new StandardDeviation(); |
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54 |
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55 for (Double value: values) { |
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56 double v = value.doubleValue(); |
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57 mean.increment(v); |
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58 std .increment(v); |
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59 } |
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60 |
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61 double m = mean.getResult(); |
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62 double s = std.getResult(); |
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63 |
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64 if (debug) { |
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65 log.debug("mean: " + m); |
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66 log.debug("std dev: " + s); |
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67 } |
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68 |
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69 double maxZ = -Double.MAX_VALUE; |
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70 int iv = -1; |
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71 for (int i = N-1; i >= 0; --i) { |
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72 double v = values.get(i).doubleValue(); |
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73 double z = Math.abs(v - m); |
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74 if (z > maxZ) { |
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75 maxZ = z; |
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76 iv = i; |
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77 } |
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78 } |
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79 |
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80 if (Math.abs(s) < EPSILON) { |
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81 return null; |
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82 } |
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83 |
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84 maxZ /= s; |
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85 |
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86 TDistributionImpl tdist = new TDistributionImpl(N-2); |
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87 |
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88 double t; |
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89 |
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90 try { |
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91 t = tdist.inverseCumulativeProbability(alpha/(N+N)); |
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92 } |
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93 catch (MathException me) { |
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94 log.error(me); |
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95 return null; |
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96 } |
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97 |
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98 t *= t; |
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99 |
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100 double za = ((N-1)/Math.sqrt(N))*Math.sqrt(t/(N-2d+t)); |
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101 |
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102 if (debug) { |
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103 log.debug("max: " + maxZ + " crit: " + za); |
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104 } |
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105 if (stdDevResult != null) { |
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106 stdDevResult[0] = std.getResult(); |
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107 } |
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108 return maxZ > za |
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109 ? Integer.valueOf(iv) |
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110 : null; |
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111 } |
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112 } |
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113 // vim:set ts=4 sw=4 si et sta sts=4 fenc=utf8 : |