Mercurial > dive4elements > river

annotate backend/src/main/java/org/dive4elements/river/importer/sinfo/parsers/TkhParser.java @ 9655:1f57381b3bb5

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Importer (s/u-info) extensions: uniform formatting of from-to series names, warning instead of cancelling in case of missing tkh column values, detecting, logging and skipping columns with wrong unit
author mschaefer
date Mon, 23 Mar 2020 15:16:35 +0100
parents ac41551a8e4d
children
rev   line source
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1 /* Copyright (C) 2017 by Bundesanstalt für Gewässerkunde
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2 * Software engineering by
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3 * Björnsen Beratende Ingenieure GmbH
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4 * Dr. Schumacher Ingenieurbüro für Wasser und Umwelt
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5 *
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6 * This file is Free Software under the GNU AGPL (>=v3)
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7 * and comes with ABSOLUTELY NO WARRANTY! Check out the
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8 * documentation coming with Dive4Elements River for details.
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9 */
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10
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11 package org.dive4elements.river.importer.sinfo.parsers;
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12
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13 import java.io.File;
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14 import java.io.FileInputStream;
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15 import java.io.InputStreamReader;
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16 import java.io.LineNumberReader;
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17 import java.text.DateFormat;
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18 import java.text.SimpleDateFormat;
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19 import java.util.ArrayList;
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20 import java.util.Date;
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21 import java.util.List;
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22 import java.util.regex.Matcher;
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23 import java.util.regex.Pattern;
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24
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25 import org.apache.log4j.Logger;
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26 import org.dive4elements.river.importer.Config;
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27 import org.dive4elements.river.importer.ImportRiver;
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28 import org.dive4elements.river.importer.ImporterSession;
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29 import org.dive4elements.river.importer.common.AbstractParser;
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30 import org.dive4elements.river.importer.common.ParsingState;
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31 import org.dive4elements.river.importer.sinfo.importitem.TkhColumnSeriesImport;
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32 import org.dive4elements.river.importer.sinfo.importitem.TkhKmLineImport;
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33 import org.dive4elements.river.importer.sinfo.importitem.TkhSeriesImport;
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34 import org.dive4elements.river.model.sinfo.Tkh;
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35 import org.dive4elements.river.model.sinfo.TkhColumn;
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36 import org.dive4elements.river.model.sinfo.TkhValue;
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37 import org.hibernate.Session;
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38
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39 /**
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40 * Reads and parses the header of a TKH file and handles the parse and store of the columns
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41 *
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42 * @author Matthias Schäfer
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43 *
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44 */
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45 public class TkhParser extends AbstractParser<TkhColumn, TkhValue, TkhKmLineImport, TkhColumnSeriesImport> {
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46
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47 /***** FIELDS *****/
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48
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49 private static final Logger log = Logger.getLogger(TkhParser.class);
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50
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51 private static final Pattern META_DATUM = Pattern.compile("^#\\sDatum:\\s*([^;]*).*", Pattern.CASE_INSENSITIVE);
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52
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53 private static final Pattern META_EVALUATOR = Pattern.compile("^#\\sAuswerter:\\s*([^;]*).*", Pattern.CASE_INSENSITIVE);
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54
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55 private static final Pattern META_SOUNDING = Pattern.compile("^#\\sPeilung:\\s*([^;]*).*", Pattern.CASE_INSENSITIVE);
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56
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57 private static final Pattern META_TYPE = Pattern.compile("^#\\sTyp:\\s*([^;]*).*", Pattern.CASE_INSENSITIVE);
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58
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59 private static final Pattern COLUMN_TITLE = Pattern.compile("Transportk((.)|(oe))rperh((.)|(oe))he\\s*\\((.+?)\\)\\s*\\[cm\\].*", Pattern.CASE_INSENSITIVE);
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60
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61 public enum GroupDirectory {
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62 NONE(Tkh.Group.NONE, ""), //
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63 CALCULATION(Tkh.Group.CALCULATION, "Berechnungsergebnisse"), //
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64 MEASUREMENT(Tkh.Group.MEASUREMENT, "Naturmessungen");
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65
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66 private final Tkh.Group group;
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67 private final String dirname;
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68
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69 GroupDirectory(final Tkh.Group group, final String dirname) {
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70 this.group = group;
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71 this.dirname = dirname;
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72 }
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73
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74 public Tkh.Group getGroup() {
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75 return this.group;
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76 }
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77
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78 public String getDirName() {
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79 return this.dirname;
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80 }
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81
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82 public static GroupDirectory forDirName(final String dirname) {
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83 for (final GroupDirectory gd : GroupDirectory.values()) {
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84 if (dirname.equalsIgnoreCase(gd.getDirName()))
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85 return gd;
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86 }
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87 return NONE;
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88 }
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89 }
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90
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91 private static final DateFormat dateFormat = new SimpleDateFormat("dd.MM.yyyy");
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92
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93 private final TkhSeriesImport tkhGroup;
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94
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95 private final List<TkhColumnParser> colParsers;
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96
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97
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98 /***** CONSTRUCTORS *****/
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99
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100 public TkhParser(final File importPath, final File rootRelativePath, final ImportRiver river) {
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101 super(importPath, rootRelativePath, river);
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102 this.tkhGroup = new TkhSeriesImport(importPath.getName().replaceAll("\\.csv", ""));
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103 this.tkhGroup.setGroup(GroupDirectory.forDirName(this.importPath.getParentFile().getName()).getGroup());
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104 this.seriesHeader = new TkhColumnSeriesImport(this.tkhGroup.getFilename(), this.tkhGroup, null, null);
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105 this.colParsers = new ArrayList<>();
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106 }
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107
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108
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109 /***** METHODS *****/
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110
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111 @Override
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112 protected Logger getLog() {
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113 return log;
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114 }
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115
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116 /**
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117 * Whether this import type shall be skipped
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118 */
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119 public static boolean shallSkip() {
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120 return Config.INSTANCE.skipSInfoTkh();
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121 }
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122
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123 /**
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124 * Creates a list of parsers for all collision import files in a directory
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125 */
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126 public static List<TkhParser> createParsers(final File importDir, final File relativeDir, final ImportRiver river) {
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127 final List<TkhParser> parsers = new ArrayList<>();
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128 if (importDir.exists())
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129 for (final File file : listFiles(importDir, ".csv"))
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130 parsers.add(new TkhParser(file, new File(relativeDir, file.getName()), river));
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131 return parsers;
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132 }
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133
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134 @Override
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diff changeset
135 public void parse() throws Exception {
8971
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
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136 getLog().info("Start parsing:;'" + this.rootRelativePath + "'");
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137 // this.seriesHeader = createSeriesImport(this.importPath.getName().replaceAll("\\.csv", ""));
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138 this.metaPatternsMatched.clear();
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139 this.kmExists.clear();
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140 this.colParsers.clear();
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141 this.headerParsingState = ParsingState.CONTINUE;
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142 try {
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143 try {
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
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144 this.in = new LineNumberReader(new InputStreamReader(new FileInputStream(this.importPath), ENCODING));
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145 }
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parents:
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146 catch (final Exception e) {
9655
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
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diff changeset
147 logError("Could not open (%s)", e.getMessage());
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148 this.headerParsingState = ParsingState.STOP;
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149 }
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150 this.currentLine = null;
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parents:
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151 while (this.headerParsingState == ParsingState.CONTINUE) {
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152 this.currentLine = this.in.readLine();
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153 if (this.currentLine == null)
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154 break;
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155 this.currentLine = this.currentLine.trim();
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parents:
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156 if (this.currentLine.isEmpty())
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157 continue;
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158 handleMetaLine();
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diff changeset
159 if (this.headerParsingState == ParsingState.DONE)
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parents: 9636
diff changeset
160 checkMetaData();
8971
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161 }
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162 }
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163 finally {
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164 if (this.in != null) {
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165 this.in.close();
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166 this.in = null;
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167 }
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168 }
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169 if (this.headerParsingState == ParsingState.STOP) {
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170 logError("Parsing of the file stopped due to a severe error");
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171 return;
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172 }
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173 for (final TkhColumnParser colParser : this.colParsers)
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174 colParser.parse();
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175 }
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176
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177 @Override
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178 protected boolean handleMetaOther() {
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dcbdff96d1a8 Tkh import with day instead of year
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179 if (handleMetaDay())
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180 return true;
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181 else if (handleMetaType())
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182 return true;
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183 else if (handleMetaSounding())
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184 return true;
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185 else if (handleMetaEvaluator())
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186 return true;
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187 else
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188 return false;
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189 }
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190
9010
dcbdff96d1a8 Tkh import with day instead of year
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191 private boolean handleMetaDay() {
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192 final Matcher m = META_DATUM.matcher(this.currentLine);
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193 if (m.matches()) {
9010
dcbdff96d1a8 Tkh import with day instead of year
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diff changeset
194 Date day = null;
dcbdff96d1a8 Tkh import with day instead of year
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parents: 8988
diff changeset
195 try {
dcbdff96d1a8 Tkh import with day instead of year
mschaefer
parents: 8988
diff changeset
196 if (!m.group(1).isEmpty())
dcbdff96d1a8 Tkh import with day instead of year
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parents: 8988
diff changeset
197 day = dateFormat.parse(m.group(1));
dcbdff96d1a8 Tkh import with day instead of year
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198 }
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diff changeset
199 catch (final Exception e) {
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parents: 9636
diff changeset
200 logLineWarning("Invalid date");
9010
dcbdff96d1a8 Tkh import with day instead of year
mschaefer
parents: 8988
diff changeset
201 }
dcbdff96d1a8 Tkh import with day instead of year
mschaefer
parents: 8988
diff changeset
202 this.metaPatternsMatched.add(META_DATUM);
dcbdff96d1a8 Tkh import with day instead of year
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parents: 8988
diff changeset
203 this.tkhGroup.setDay(day);
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parents: 8988
diff changeset
204 if (day == null)
9655
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parents: 9636
diff changeset
205 logLineWarning("No date specified");
8971
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206 return true;
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parents:
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207 }
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208 return false;
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parents:
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209 }
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210
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211 private boolean handleMetaType() {
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212 final Matcher m = META_TYPE.matcher(this.currentLine);
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213 return m.matches();
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214 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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215
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parents:
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216 private boolean handleMetaSounding() {
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parents:
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217 final Matcher m = META_SOUNDING.matcher(this.currentLine);
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218 if (m.matches()) {
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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diff changeset
219 this.metaPatternsMatched.add(META_SOUNDING);
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
diff changeset
220 this.tkhGroup.setSounding_info(parseMetaInfo(m.group(1).trim()));
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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221 return true;
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parents:
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222 }
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223 return false;
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224 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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225
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226 private boolean handleMetaEvaluator() {
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227 final Matcher m = META_EVALUATOR.matcher(this.currentLine);
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228 if (m.matches()) {
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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229 this.metaPatternsMatched.add(META_EVALUATOR);
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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230 this.tkhGroup.setEvaluation_by(parseMetaInfo(m.group(1).trim()));
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231 return true;
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parents:
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232 }
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233 return false;
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234 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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235
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236 @Override
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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237 protected boolean handleMetaColumnTitles() {
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parents:
diff changeset
238 if (!super.handleMetaColumnTitles())
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239 return false;
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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diff changeset
240 this.tkhGroup.setKmrange_info(this.seriesHeader.getKmrange_info());
9038
4c5eeaff554c Database column "comment" renamed to "notes" (restrictions in Oracle)
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parents: 9032
diff changeset
241 this.tkhGroup.setNotes(this.seriesHeader.getNotes());
8971
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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242 for (int i = 1; i <= this.columnTitles.size() - 1; i++) {
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
diff changeset
243 final Matcher m = COLUMN_TITLE.matcher(this.columnTitles.get(i));
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parents:
diff changeset
244 if (m.matches())
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
diff changeset
245 this.colParsers.add(new TkhColumnParser(this.importPath, this.rootRelativePath, this.river, this.tkhGroup, i, m.group(7).trim()));
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
diff changeset
246 else
9655
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
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parents: 9636
diff changeset
247 logLineWarning("Invalid title in column %d (%s)", i + 1, this.columnTitles.get(i));
8971
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
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248 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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diff changeset
249 return true;
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parents:
diff changeset
250 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
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parents:
diff changeset
251
9655
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parents: 9636
diff changeset
252 /**
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
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parents: 9636
diff changeset
253 * Checks the existence of the active series in the database
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
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parents: 9636
diff changeset
254 */
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
255 @Override
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
256 protected boolean checkSeriesExistsAlready() {
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
257 if (!checkRiverExists())
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
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parents: 9636
diff changeset
258 return false;
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
259 final Session session = ImporterSession.getInstance().getDatabaseSession();
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
260 final List<Tkh> rows = this.tkhGroup.querySeriesItem(session, this.river.getPeer());
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
261 return !rows.isEmpty();
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
262 }
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
263
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
264
8971
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
265 @Override
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
266 public void store() {
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
267 if (this.headerParsingState != ParsingState.STOP) {
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
268 this.tkhGroup.getPeer(this.river.getPeer());
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
269 for (final TkhColumnParser colParser : this.colParsers)
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
270 colParser.store();
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
271 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
272 else
9655
1f57381b3bb5 Importer (s/u-info) extensions: uniform formatting of from-to series names,
mschaefer
parents: 9636
diff changeset
273 logWarning("Severe parsing errors, not storing series '%s'", this.tkhGroup.getFilename());
8971
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
274 }
50416a0df385 Importer for the Schifffahrt (S-INFO) and Oekologie (U-INFO) files
mschaefer
parents:
diff changeset
275
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276 @Override
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277 protected TkhColumnSeriesImport createSeriesImport(final String filename) {
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278 throw new UnsupportedOperationException();
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279 }
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280
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281 @Override
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282 protected TkhKmLineImport createKmLineImport(final Double km, final String[] values) {
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283 throw new UnsupportedOperationException();
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284 }
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285 }
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