annotate artifacts/src/main/java/org/dive4elements/river/artifacts/math/StdDevOutlier.java @ 5863:4897a58c8746

River artifacts: Added new copyright headers.
author Sascha L. Teichmann <teichmann@intevation.de>
date Sun, 28 Apr 2013 14:40:59 +0200
parents 5aa05a7a34b7
children af13ceeba52a
rev   line source
5863
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
1 /* Copyright (C) 2011, 2012, 2013 by Bundesanstalt für Gewässerkunde
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
2 * Software engineering by Intevation GmbH
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
3 *
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
4 * This file is Free Software under the GNU AGPL (>=v3)
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
5 * and comes with ABSOLUTELY NO WARRANTY! Check out the
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
6 * documentation coming with Dive4Elements River for details.
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
7 */
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
8
5831
bd047b71ab37 Repaired internal references
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4816
diff changeset
9 package org.dive4elements.river.artifacts.math;
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
10
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
11 import java.util.List;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
12
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
13 import org.apache.commons.math.stat.descriptive.moment.StandardDeviation;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
14
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
15 import org.apache.log4j.Logger;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
16
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
17 public class StdDevOutlier
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
18 {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
19 public static final double DEFAULT_FACTOR = 3;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
20
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
21 private static Logger log = Logger.getLogger(StdDevOutlier.class);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
22
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
23 protected StdDevOutlier() {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
24 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
25
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
26 public static Integer findOutlier(List<Double> values) {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
27 return findOutlier(values, DEFAULT_FACTOR, null);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
28 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
29
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
30 public static Integer findOutlier(
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
31 List<Double> values,
4816
846b0441f905 Removed trailing whitespace.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4795
diff changeset
32 double factor,
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
33 double [] stdDevResult
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
34 ) {
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
35 boolean debug = log.isDebugEnabled();
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
36
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
37 if (debug) {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
38 log.debug("factor for std dev: " + factor);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
39 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
40
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
41 int N = values.size();
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
42
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
43 if (debug) {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
44 log.debug("Values to check: " + N);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
45 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
46
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
47 if (N < 3) {
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
48 return null;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
49 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
50
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
51 StandardDeviation stdDev = new StandardDeviation();
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
52
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
53 double maxValue = -Double.MAX_VALUE;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
54 int maxIndex = -1;
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
55 for (int i = N-1; i >= 0; --i) {
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
56 double value = Math.abs(values.get(i));
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
57 stdDev.increment(value);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
58 if (value > maxValue) {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
59 maxValue = value;
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
60 maxIndex = i;
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
61 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
62 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
63
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
64 double sd = stdDev.getResult();
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
65
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
66 double accepted = factor * sd;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
67
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
68 if (debug) {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
69 log.debug("std dev: " + stdDev);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
70 log.debug("accepted: " + accepted);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
71 log.debug("max value: " + maxValue);
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
72 }
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
73
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
74 if (stdDevResult != null) {
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
75 stdDevResult[0] = sd;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
76 }
4795
8ee270a3ef25 Small code cleanups in S/Q outlier tests.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 4794
diff changeset
77
4794
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
78 return maxValue > accepted ? maxIndex : null;
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
79 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
80 }
a7d080347ac3 MINFO: Allow two methods for outlier test in SQ relation.
Raimund Renkert <rrenkert@intevation.de>
parents:
diff changeset
81 // vim:set ts=4 sw=4 si et sta sts=4 fenc=utf8 :

http://dive4elements.wald.intevation.org