Mercurial > dive4elements > river

annotate artifacts/src/main/java/org/dive4elements/river/artifacts/math/fitting/App.java @ 5863:4897a58c8746

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River artifacts: Added new copyright headers.
author Sascha L. Teichmann <teichmann@intevation.de>
date Sun, 28 Apr 2013 14:40:59 +0200
parents 5aa05a7a34b7
children af13ceeba52a
rev   line source
5863
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
1 /* Copyright (C) 2011, 2012, 2013 by Bundesanstalt für Gewässerkunde
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
2 * Software engineering by Intevation GmbH
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
3 *
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
4 * This file is Free Software under the GNU AGPL (>=v3)
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
5 * and comes with ABSOLUTELY NO WARRANTY! Check out the
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
6 * documentation coming with Dive4Elements River for details.
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
7 */
4897a58c8746 River artifacts: Added new copyright headers.
Sascha L. Teichmann <teichmann@intevation.de>
parents: 5838
diff changeset
8
5831
bd047b71ab37 Repaired internal references
Sascha L. Teichmann <teichmann@intevation.de>
parents: 3076
diff changeset
9 package org.dive4elements.river.artifacts.math.fitting;
2569
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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10
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
diff changeset
11 import java.util.List;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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12 import java.util.Map;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
diff changeset
13 import java.util.ArrayList;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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14 import java.util.TreeMap;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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15 import java.util.Comparator;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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16
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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17 import java.io.IOException;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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18 import java.io.BufferedReader;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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19 import java.io.Reader;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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20 import java.io.InputStreamReader;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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21
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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22 import org.apache.commons.math.optimization.fitting.CurveFitter;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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23
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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24 import org.apache.commons.math.optimization.general.LevenbergMarquardtOptimizer;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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25
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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26 import org.apache.commons.math.MathException;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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27
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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28 public class App
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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29 {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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30 public static final double EPS = 1e-5;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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31
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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32 public static final String FUNCTION_NAME =
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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33 System.getProperty("function", "linear");
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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34
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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35 public static final Comparator<Double> EPS_CMP =
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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36 new Comparator<Double>() {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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37 @Override
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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38 public int compare(Double a, Double b) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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39 double diff = a - b;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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40 if (diff < -EPS) return -1;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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41 if (diff > EPS) return +1;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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42 return 0;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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43 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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44 };
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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45
3076
5642a83420f2 FLYS artifacts: Removed trailing whitespace.
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents: 2569
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46 public static final List<Double []>readPoints(Reader reader)
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0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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47 throws IOException
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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48 {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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49 Map<Double, Double> map = new TreeMap<Double, Double>(EPS_CMP);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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50
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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51 BufferedReader input = new BufferedReader(reader);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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52
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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53 String line;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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54 while ((line = input.readLine()) != null) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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55 if ((line = line.trim()).length() == 0 || line.startsWith("#")) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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56 continue;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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57 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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58
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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59 String [] parts = line.split("\\s+");
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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60
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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61 if (parts.length < 2) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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62 continue;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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63 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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64
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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65 try {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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66 Double x = Double.valueOf(parts[0]);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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67 Double y = Double.valueOf(parts[1]);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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68
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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69 Double old = map.put(x, y);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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70
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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71 if (old != null) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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72 System.err.println("duplicate x: " + x);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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73 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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74 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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75 catch (NumberFormatException nfe) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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76 nfe.printStackTrace();
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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77 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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78 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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79
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
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80 List<Double []> list = new ArrayList<Double []>(map.size());
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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81
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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82 for (Map.Entry<Double, Double> entry: map.entrySet()) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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83 list.add(new Double [] { entry.getKey(), entry.getValue() });
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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84 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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85
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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86 return list;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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87 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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88
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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89 public static void main(String [] args) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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90
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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91 Function function = FunctionFactory
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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92 .getInstance()
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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93 .getFunction(FUNCTION_NAME);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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94
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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95 if (function == null) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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96 System.err.println("Cannot find function '" + FUNCTION_NAME + "'.");
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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97 System.exit(1);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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98 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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99
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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100 List<Double []> points = null;
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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parents:
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101
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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102 try {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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103 points = readPoints(new InputStreamReader(System.in));
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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104 }
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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105 catch (IOException ioe) {
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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106 ioe.printStackTrace();
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
Sascha L. Teichmann <sascha.teichmann@intevation.de>
parents:
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107 System.exit(1);
0dd58ab7e118 Added functions to be used for fitting in the "Fixierungsanalyse" and "Extremwertermittlung".
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108 }
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109
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110 LevenbergMarquardtOptimizer lmo = new LevenbergMarquardtOptimizer();
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111
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112 CurveFitter cf = new CurveFitter(lmo);
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113
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114 for (Double [] point: points) {
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115 cf.addObservedPoint(point[0], point[1]);
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116 }
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117
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118 double [] parameters = null;
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119
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120 try {
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121 parameters = cf.fit(function, function.getInitialGuess());
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122 }
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123 catch (MathException me) {
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124 me.printStackTrace();
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125 System.exit(1);
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126 }
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127
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128 String [] parameterNames = function.getParameterNames();
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129
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130 for (int i = 0; i < parameterNames.length; ++i) {
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131 System.err.println(parameterNames[i] + ": " + parameters[i]);
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132 }
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133 }
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134 }
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135 // vim:set ts=4 sw=4 si et sta sts=4 fenc=utf8 :
http://dive4elements.wald.intevation.org