Mercurial > dive4elements > river
annotate artifacts/src/main/java/org/dive4elements/river/artifacts/model/minfo/SedimentLoadData.java @ 8240:61fd22f65bd4
(issue1448) Actually filter out not matching sq_time_interval_ids
author | Andre Heinecke <andre.heinecke@intevation.de> |
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date | Mon, 08 Sep 2014 19:48:17 +0200 |
parents | b207eeb66edd |
children | f8ea1a7ecde6 |
rev | line source |
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New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
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1 /* Copyright (C) 2014 by Bundesanstalt für Gewässerkunde |
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Sascha L. Teichmann <teichmann@intevation.de>
parents:
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2 * Software engineering by Intevation GmbH |
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New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
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3 * |
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4 * This file is Free Software under the GNU AGPL (>=v3) |
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5 * and comes with ABSOLUTELY NO WARRANTY! Check out the |
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New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
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6 * documentation coming with Dive4Elements River for details. |
5e3f4b4fcb28
New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
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7 */ |
5e3f4b4fcb28
New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
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8 package org.dive4elements.river.artifacts.model.minfo; |
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Sascha L. Teichmann <teichmann@intevation.de>
parents:
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9 |
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10 import java.io.Serializable; |
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11 import java.util.ArrayList; |
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12 import java.util.Collection; |
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13 import java.util.Collections; |
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14 import java.util.Comparator; |
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15 import java.util.Date; |
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16 import java.util.List; |
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17 import java.util.TreeMap; |
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18 import java.util.TreeSet; |
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19 import java.util.Iterator; |
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20 |
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21 import org.apache.log4j.Logger; |
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22 |
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Make it compile again.
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23 import org.dive4elements.river.backend.utils.EpsilonComparator; |
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parents:
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24 |
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25 public class SedimentLoadData implements Serializable |
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26 { |
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sed src/**/*.java 's/logger/log/g'
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27 private static Logger log = Logger.getLogger(SedimentLoadData.class); |
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28 |
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29 public static final int GF_UNKNOWN = -1; |
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30 public static final int GF_COARSE = 0; |
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31 public static final int GF_FINE_MIDDLE = 1; |
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32 public static final int GF_SAND = 2; |
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33 public static final int GF_SUSP_SAND = 3; |
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34 public static final int GF_SUSP_SAND_BED = 4; |
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35 public static final int GF_SUSP_SEDIMENT = 5; |
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36 public static final int GF_TOTAL = 6; |
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37 public static final int GF_BED_LOAD = 7; |
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38 public static final int GF_BED_LOAD_SUSP_SAND = 8; |
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39 public static final int GF_MAX = 8; |
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parents:
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40 |
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41 public static final String [] GF_NAMES = { |
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42 "coarse", |
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43 "fine_middle", |
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44 "sand", |
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45 "susp_sand", |
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46 "susp_sand_bed", |
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47 "suspended_sediment", |
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48 "total", |
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49 "bed_load", |
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50 "bed_load_susp_sand" |
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51 }; |
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52 |
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53 public static final int [] MEASUREMENT_STATION_GF = { |
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54 /* GF_COARSE */ Station.BED_LOAD, |
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55 /* GF_FINE_MIDDLE */ Station.BED_LOAD, |
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56 /* GF_SAND */ Station.BED_LOAD, |
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57 /* GF_SUSP_SAND */ Station.BED_LOAD, |
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58 /* GF_SUSP_SAND_BED */ Station.BED_LOAD, |
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59 /* GF_SUSP_SEDIMENT */ Station.SUSPENDED, |
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60 /* GF_TOTAL */ Station.BED_LOAD|Station.SUSPENDED, |
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61 /* GF_BED_LOAD */ Station.BED_LOAD, |
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62 /* GF_BED_LOAD_SUSP_SAND */ Station.BED_LOAD |
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63 }; |
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64 |
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65 public static final int measurementStationType(int grainFraction) { |
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66 return grainFraction < 0 || grainFraction >= MEASUREMENT_STATION_GF.length |
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67 ? Station.UNKNOWN |
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68 : MEASUREMENT_STATION_GF[grainFraction]; |
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69 } |
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70 |
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71 public static final int grainFractionIndex(String name) { |
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72 for (int i = 0; i < GF_NAMES.length; ++i) { |
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73 if (GF_NAMES[i].equals(name)) { |
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74 return i; |
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75 } |
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76 } |
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77 return GF_UNKNOWN; |
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78 } |
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79 |
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80 public static final String grainFractionName(int index) { |
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81 return index >= 0 && index < GF_NAMES.length |
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82 ? GF_NAMES[index] |
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83 : "unknown"; |
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84 } |
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85 |
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86 |
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87 public interface Visitor { |
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88 void visit(Station station); |
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89 } |
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90 |
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91 public static class Value implements Serializable { |
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92 |
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93 public interface Filter { |
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94 boolean accept(Value value); |
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95 } |
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96 |
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97 public interface Visitor { |
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98 void visit(Value value); |
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99 } |
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100 |
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101 private double value; |
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102 |
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103 private Load load; |
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104 |
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105 public Value() { |
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106 } |
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107 |
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108 public Value(Load load, double value) { |
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109 this.load = load; |
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110 this.value = value; |
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111 } |
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112 |
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113 public double getValue() { |
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114 return value; |
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115 } |
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116 |
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117 public Load getLoad() { |
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118 return load; |
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119 } |
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120 } // class Value |
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121 |
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122 |
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123 public static class Load implements Serializable { |
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124 |
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125 private int id; |
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126 private int kind; |
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127 private Integer sqTiId; |
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128 |
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129 private String description; |
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130 |
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131 private Date startTime; |
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132 private Date stopTime; |
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133 private Date sqStartTime; |
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134 private Date sqStopTime; |
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135 |
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136 public Load() { |
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137 } |
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138 |
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139 public Load( |
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140 int id, |
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141 int kind, |
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142 String description, |
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143 Date startTime, |
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144 Date stopTime, |
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145 Integer sqTiId, |
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146 Date sqStartTime, |
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147 Date sqStopTime |
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148 ) { |
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149 this.id = id; |
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150 this.kind = kind; |
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151 this.description = description; |
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152 this.startTime = startTime; |
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153 this.stopTime = stopTime; |
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154 this.sqStartTime = sqStartTime; |
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155 this.sqStopTime = sqStopTime; |
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156 this.sqTiId = sqTiId; |
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157 } |
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158 |
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159 public int getId() { |
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160 return id; |
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161 } |
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162 |
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163 public Integer getSQRelationTimeIntervalId() { |
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164 return sqTiId; |
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165 } |
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166 |
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167 public int getKind() { |
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168 return kind; |
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169 } |
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170 |
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171 public String getDescription() { |
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172 return description; |
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173 } |
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174 |
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175 public Date getStartTime() { |
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176 return startTime; |
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177 } |
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178 |
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179 public Date getStopTime() { |
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180 return stopTime; |
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181 } |
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182 |
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183 public Date getSQStartTime() { |
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184 return sqStartTime; |
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185 } |
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186 |
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187 public Date getSQStopTime() { |
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188 return sqStopTime; |
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189 } |
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190 |
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191 public boolean isEpoch() { |
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192 return startTime != null && stopTime != null; |
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193 } |
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194 } // class Load |
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195 |
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196 public static class Station implements Serializable { |
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197 |
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198 public static final int UNKNOWN = 0; |
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199 public static final int BED_LOAD = 1; |
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200 public static final int SUSPENDED = 2; |
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201 |
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202 private double station; |
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203 |
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204 private int type; |
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205 |
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206 private List<List<Value>> grainFractions; |
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207 |
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208 private Station prev; |
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209 |
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210 public Station() { |
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211 this(BED_LOAD, 0.0); |
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212 } |
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213 |
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214 public Station(int type, double station) { |
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215 grainFractions = new ArrayList<List<Value>>(GF_MAX+1); |
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216 for (int i = 0; i < GF_MAX+1; ++i) { |
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217 grainFractions.add(null); |
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218 } |
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219 this.type = type; |
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220 this.station = station; |
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221 } |
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222 |
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223 public void allLoads(Collection<Load> loads) { |
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224 for (List<Value> values: grainFractions) { |
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225 if (values != null) { |
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226 for (Value value: values) { |
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227 loads.add(value.getLoad()); |
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228 } |
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229 } |
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230 } |
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231 } |
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232 |
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233 public double getStation() { |
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234 return station; |
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235 } |
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236 |
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237 public int getType() { |
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238 return type; |
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239 } |
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240 |
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241 public boolean isType(int type) { |
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242 return (this.type & type) != 0; |
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243 } |
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244 |
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245 public void setPrev(Station prev) { |
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246 this.prev = prev; |
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247 } |
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248 |
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249 public Station getPrev() { |
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250 return prev; |
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251 } |
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252 |
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253 public void merge(Station other) { |
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254 this.type |= other.type; |
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255 for (int i = 0, N = grainFractions.size(); i < N; ++i) { |
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256 grainFractions.set(i, |
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257 mergeValues(grainFractions.get(i), other.grainFractions.get(i))); |
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258 } |
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259 } |
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260 |
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261 private static final Comparator<Value> ID_CMP = new Comparator<Value>() { |
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262 @Override |
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263 public int compare(Value a, Value b) { |
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264 return a.getLoad().getId() - b.getLoad().getId(); |
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265 } |
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266 }; |
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267 |
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268 private static List<Value> mergeValues(List<Value> a, List<Value> b) { |
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269 if (a == null) return b; |
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270 if (b == null) return a; |
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271 a.addAll(b); |
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272 // re-establish id order. |
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273 Collections.sort(a, ID_CMP); |
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274 return a; |
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275 } |
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276 |
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277 public Station prevByType(int type) { |
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278 for (Station curr = this; curr != null; curr = curr.getPrev()) { |
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279 if (curr.isType(type)) { |
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280 return curr; |
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281 } |
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282 } |
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283 return null; |
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284 } |
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285 |
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286 public void addValue(int grainFraction, Value value) { |
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287 List<Value> values = grainFractions.get(grainFraction); |
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288 if (values == null) { |
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289 values = new ArrayList<Value>(); |
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290 grainFractions.set(grainFraction, values); |
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291 } |
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292 values.add(value); |
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293 } |
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294 |
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295 public boolean hasGrainFraction(String grainFraction) { |
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296 return hasGrainFraction(grainFractionIndex(grainFraction)); |
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297 } |
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298 |
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299 public boolean hasGrainFraction(int grainFraction) { |
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300 List<Value> values = grainFractions.get(grainFraction); |
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301 return values != null && !values.isEmpty(); |
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302 } |
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303 |
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304 public void filterGrainFraction( |
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305 int grainFraction, |
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306 Value.Filter filter, |
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307 Value.Visitor visitor |
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308 ) { |
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309 List<Value> values = grainFractions.get(grainFraction); |
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310 if (values != null && !values.isEmpty()) { |
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311 for (Value value: values) { |
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312 if (filter.accept(value)) { |
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313 visitor.visit(value); |
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314 } |
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315 } |
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316 } |
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317 } |
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318 |
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319 public List<Value> filterGrainFraction(int grainFraction, Value.Filter filter) { |
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320 final List<Value> result = new ArrayList<Value>(); |
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321 filterGrainFraction(grainFraction, filter, new Value.Visitor() { |
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322 @Override |
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323 public void visit(Value value) { |
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324 result.add(value); |
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325 } |
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326 }); |
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327 return result; |
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328 } |
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329 |
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330 public double findValueByLoadId(int id) { |
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331 for (List<Value> values: grainFractions) { |
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332 double value = findValueByLoadId(values, id); |
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333 if (!Double.isNaN(value)) { |
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334 return value; |
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335 } |
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336 } |
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337 return Double.NaN; |
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338 } |
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339 |
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340 private static final double findValueByLoadId( |
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341 List<Value> values, |
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342 int id |
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343 ) { |
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344 if (values == null) { |
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345 return Double.NaN; |
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346 } |
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347 // List is ordered by station id -> binary search. |
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348 int lo = 0, hi = values.size()-1; |
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349 while (lo <= hi) { |
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350 int mid = (lo + hi)/2; |
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351 Value v = values.get(mid); |
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352 int xid = v.getLoad().getId(); |
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786bb4f87e8d
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353 if (xid > id) hi = mid-1; |
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354 else if (xid < id) lo = mid+1; |
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355 else return v.getValue(); |
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356 } |
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357 |
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358 return Double.NaN; |
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359 } |
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360 } // class Station |
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361 |
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362 |
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363 private Station [] stations; |
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364 |
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365 public SedimentLoadData() { |
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366 } |
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367 |
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368 public SedimentLoadData(Collection<Station> stations, boolean kmUp) { |
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369 setStations(stations, kmUp); |
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370 } |
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371 |
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|
372 public Station[] getStations() { |
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373 return stations; |
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374 } |
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375 |
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376 public void setStations(Collection<Station> stations, boolean kmUp) { |
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377 TreeMap<Double, Station> same = |
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378 new TreeMap<Double, Station>(EpsilonComparator.CMP); |
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379 |
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380 for (Station station: stations) { |
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381 Double key = station.getStation(); |
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382 Station st = same.get(key); |
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383 if (st == null) { |
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384 same.put(key, station); |
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385 } else { |
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Sediment load: Merge measurement stations if they have the same km. The chaining was too complicated to build algorithms on top of it.
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386 st.merge(station); |
8034
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387 } |
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388 } |
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389 this.stations = new Station[same.size()]; |
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390 int i = 0; |
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391 for (Station station: same.values()) { |
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392 this.stations[i++] = station; |
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393 } |
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|
394 wireNeighbors(kmUp); |
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Wire the neighbors to the measurement stations together. This eases the lookup for same types (suspended or bed load).
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395 } |
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New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
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|
396 |
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397 private void wireNeighbors(boolean kmUp) { |
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398 if (kmUp) { |
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399 for (int i = stations.length - 1; i > 0; --i) { |
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400 stations[i-1].setPrev(stations[i]); |
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|
401 } |
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|
402 } |
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|
403 else { |
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|
404 for (int i = 1; i < stations.length; ++i) { |
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|
405 stations[i].setPrev(stations[i-1]); |
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|
406 } |
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New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
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parents:
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407 } |
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New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
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408 } |
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Sediment loads from cache are sorted in station order so range filters
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|
409 |
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410 private void recursiveFindStations( |
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411 double a, double b, |
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412 int lo, int hi, |
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413 Visitor visitor |
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414 ) { |
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415 while (lo <= hi) { |
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416 int mid = (lo+hi)/2; |
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417 Station st = stations[mid]; |
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418 double station = st.getStation(); |
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419 if (station < a) { |
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420 lo = mid+1; |
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421 } else if (station > b) { |
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|
422 hi = mid-1; |
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423 } else { |
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424 recursiveFindStations(a, b, lo, mid-1, visitor); |
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425 visitor.visit(st); |
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426 lo = mid+1; |
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427 } |
8035
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428 } |
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|
429 } |
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430 |
8123
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431 public static final Comparator<Load> LOAD_ID_CMP = new Comparator<Load>() { |
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432 @Override |
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433 public int compare(Load a, Load b) { |
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434 return a.getId() - b.getId(); |
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|
435 } |
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436 }; |
4a2ef6895557
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437 |
8199
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438 public static final Comparator<Load> LOAD_SQ_TI_CMP = new Comparator<Load>() { |
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439 @Override |
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440 public int compare(Load a, Load b) { |
8239
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441 Integer a_id = a.getSQRelationTimeIntervalId(); |
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442 Integer b_id = b.getSQRelationTimeIntervalId(); |
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443 if (a_id == null && b_id == null) { |
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444 return 0; |
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445 } |
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446 if (a_id == null) { |
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447 return -1; |
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448 } |
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449 if (b_id == null) { |
b207eeb66edd
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450 return 1; |
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(issue1448) Objectify sq_time_interval id.
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|
451 } |
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452 return a_id - b_id; |
8199
42ac86ec19c7
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453 } |
42ac86ec19c7
(issue1448) Add sq time intervals to sediment load data model.
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|
454 }; |
42ac86ec19c7
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|
455 |
42ac86ec19c7
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|
456 /** Find all loads in the range a/b with the according sq_time_interval */ |
8239
b207eeb66edd
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457 public Collection<Load> findLoads(double a, double b, Integer sqRelationTimeInterval) { |
b207eeb66edd
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458 final TreeSet<Load> loads = new TreeSet<Load>(LOAD_ID_CMP); |
8199
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459 |
42ac86ec19c7
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|
460 findStations(a, b, new Visitor() { |
42ac86ec19c7
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461 @Override |
42ac86ec19c7
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462 public void visit(Station station) { |
42ac86ec19c7
(issue1448) Add sq time intervals to sediment load data model.
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|
463 station.allLoads(loads); |
42ac86ec19c7
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464 } |
42ac86ec19c7
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465 }); |
42ac86ec19c7
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|
466 |
8240
61fd22f65bd4
(issue1448) Actually filter out not matching sq_time_interval_ids
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467 /* This may not be the most beautiful thing to do but well,.. */ |
61fd22f65bd4
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468 for (Iterator<Load> it = loads.iterator(); it.hasNext();) { |
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469 Integer obj = it.next().getSQRelationTimeIntervalId(); |
61fd22f65bd4
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470 if ((obj == null && sqRelationTimeInterval != null) || |
61fd22f65bd4
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471 (obj != null && !obj.equals(sqRelationTimeInterval))) { |
61fd22f65bd4
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472 it.remove(); |
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|
473 } |
61fd22f65bd4
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|
474 } |
61fd22f65bd4
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|
475 |
8199
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476 return loads; |
42ac86ec19c7
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|
477 } |
42ac86ec19c7
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|
478 |
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479 /** Get a list of loads with unique sq_time_intervals. |
42ac86ec19c7
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480 * |
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481 * This is mainly a convenience function for the SedimentLoadInfoService. |
42ac86ec19c7
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482 */ |
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483 public Collection<Load> findUniqueTimeIntervalLoads(double a, double b) { |
42ac86ec19c7
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484 final TreeSet<Load> loads = new TreeSet<Load>(LOAD_SQ_TI_CMP); |
42ac86ec19c7
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|
485 |
42ac86ec19c7
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|
486 findStations(a, b, new Visitor() { |
42ac86ec19c7
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487 @Override |
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488 public void visit(Station station) { |
42ac86ec19c7
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489 station.allLoads(loads); |
42ac86ec19c7
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490 } |
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491 }); |
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|
492 |
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|
493 return loads; |
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494 } |
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|
495 |
8123
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|
496 public Collection<Load> findLoads(double a, double b) { |
8140
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Added missing generics parameter.
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|
497 final TreeSet<Load> loads = new TreeSet<Load>(LOAD_ID_CMP); |
8123
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
498 |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
499 findStations(a, b, new Visitor() { |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
500 @Override |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
501 public void visit(Station station) { |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
502 station.allLoads(loads); |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
503 } |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
504 }); |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
505 |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
506 return loads; |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
507 } |
4a2ef6895557
Sediment load: Fixed findStations() and add findLoads().
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8100
diff
changeset
|
508 |
8035
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
509 public void findStations(double a, double b, Visitor visitor) { |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
510 if (a > b) { |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
511 double t = a; a = b; b = t; |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
512 } |
8040
f1500a524b76
Replace station list with a plain array.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8039
diff
changeset
|
513 recursiveFindStations(a, b, 0, stations.length-1, visitor); |
8035
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
514 } |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
515 |
8038
aa622bddfdac
Directly chain stations with the same km position together. This ease some summations.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8036
diff
changeset
|
516 public List<Station> findStations(double a, double b) { |
aa622bddfdac
Directly chain stations with the same km position together. This ease some summations.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8036
diff
changeset
|
517 final List<Station> result = new ArrayList<Station>(); |
8035
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
518 findStations(a, b, new Visitor() { |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
519 @Override |
8038
aa622bddfdac
Directly chain stations with the same km position together. This ease some summations.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8036
diff
changeset
|
520 public void visit(Station station) { |
aa622bddfdac
Directly chain stations with the same km position together. This ease some summations.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8036
diff
changeset
|
521 result.add(station); |
8035
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
522 } |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
523 }); |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
524 return result; |
f2dc7992b8a3
Sediment loads from cache are sorted in station order so range filters
Sascha L. Teichmann <teichmann@intevation.de>
parents:
8034
diff
changeset
|
525 } |
8033
5e3f4b4fcb28
New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
diff
changeset
|
526 } |
5e3f4b4fcb28
New way to loaded sediment loads from database and cache it. The data structure a way more straight forward. TODO: Implement calculation on this basis.
Sascha L. Teichmann <teichmann@intevation.de>
parents:
diff
changeset
|
527 // vim:set ts=4 sw=4 si et sta sts=4 fenc=utf8 : |